Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_06470 | Not Available | - | 5202155 - 5202961 | 28820.7 |
| hypothetical protein | N824_06475 | Not Available | + | 5203159 - 5204208 | 39575.9 |
| luxr family transcriptional regulator | N824_06480 | Not Available | - | 5204209 - 5204946 | 28158.7 |
| hypothetical protein | N824_06485 | Not Available | + | 5204959 - 5205093 | 5048.35 |
| adenine phosphoribosyltransferase | N824_06490 | Not Available | - | 5205193 - 5205720 | 19157.4 |
| hypothetical protein | N824_06495 | Not Available | - | 5205723 - 5205887 | 6264.52 |
| hypothetical protein | N824_06500 | Not Available | - | 5205914 - 5206171 | 9786.66 |
| hypothetical protein | N824_06505 | Not Available | - | 5206226 - 5206387 | 6220.64 |
| hypothetical protein | N824_06510 | Not Available | + | 5206439 - 5206612 | 6121.65 |
| hypothetical protein | N824_06515 | Not Available | + | 5206766 - 5207800 | 38332.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.