Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | N824_06120 | Not Available | - | 5136205 - 5136756 | 20022.0 |
| membrane protein | N824_06125 | Not Available | - | 5136812 - 5137354 | 21004.6 |
| membrane protein | N824_06130 | Not Available | - | 5137362 - 5139902 | 94835.2 |
| udp pyrophosphate synthase | N824_06135 | Not Available | - | 5139966 - 5140706 | 28286.8 |
| hypothetical protein | N824_06140 | Not Available | - | 5140726 - 5141547 | 26788.4 |
| hypothetical protein | N824_06145 | Not Available | - | 5141549 - 5142043 | 18426.0 |
| hypothetical protein | N824_06150 | Not Available | - | 5142040 - 5142432 | 13820.9 |
| hypothetical protein | N824_06155 | Not Available | - | 5142478 - 5143140 | 24926.8 |
| alpha/beta hydrolase | N824_06160 | Not Available | - | 5143140 - 5143904 | 29047.2 |
| aspartyl-trna amidotransferase subunit b | N824_06165 | Not Available | - | 5144015 - 5144461 | 16434.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.