Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_06020 | Not Available | - | 5106838 - 5110143 | 122738.0 |
| hypothetical protein | N824_06025 | Not Available | - | 5110399 - 5111535 | 42494.7 |
| hypothetical protein | N824_06030 | Not Available | - | 5111608 - 5112201 | 22592.3 |
| hypothetical protein | N824_06035 | Not Available | + | 5112580 - 5113194 | 24054.0 |
| hypothetical protein | N824_06040 | Not Available | + | 5113324 - 5114676 | 50496.4 |
| hypothetical protein | N824_06045 | Not Available | + | 5114699 - 5115733 | 37039.3 |
| multidrug transporter acrb | N824_06050 | Not Available | + | 5115750 - 5118809 | 112063.0 |
| hypothetical protein | N824_06055 | Not Available | + | 5118911 - 5119582 | 25253.3 |
| amino acid transporter | N824_06060 | Not Available | - | 5119641 - 5121092 | 52532.2 |
| membrane-bound proton-translocating pyrophosphatase | N824_06065 | Not Available | + | 5121535 - 5123901 | 82163.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.