Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_05970 | Not Available | - | 5094435 - 5095091 | 24939.0 |
| hypothetical protein | N824_05975 | Not Available | - | 5095120 - 5097351 | 82723.1 |
| hypothetical protein | N824_05980 | Not Available | - | 5097428 - 5098132 | 27194.1 |
| hypothetical protein | N824_05985 | Not Available | - | 5098129 - 5099154 | 39589.7 |
| aldehyde dehydrogenase | N824_05990 | Not Available | - | 5099261 - 5100625 | 50479.1 |
| hypothetical protein | N824_05995 | Not Available | - | 5100622 - 5101338 | 27318.1 |
| alcohol dehydrogenase | N824_06000 | Not Available | - | 5101349 - 5102497 | 42009.7 |
| glutamine synthetase | N824_06005 | Not Available | - | 5102534 - 5103892 | 51041.1 |
| hypothetical protein | N824_06010 | Not Available | - | 5103889 - 5105205 | 47156.1 |
| hypothetical protein | N824_06015 | Not Available | - | 5105247 - 5106803 | 58326.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.