Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_05915 | Not Available | + | 5082444 - 5082668 | 8628.21 |
| hypothetical protein | N824_05920 | Not Available | - | 5082657 - 5084942 | 86827.5 |
| hypothetical protein | N824_05925 | Not Available | - | 5085302 - 5086114 | 29554.6 |
| hypothetical protein | N824_05930 | Not Available | - | 5086120 - 5088447 | 86698.7 |
| hypothetical protein | N824_05935 | Not Available | - | 5088613 - 5089485 | 31554.3 |
| hypothetical protein | N824_05940 | Not Available | - | 5089571 - 5090020 | 17042.7 |
| hypothetical protein | N824_05945 | Not Available | - | 5090083 - 5090667 | 22693.2 |
| hypothetical protein | N824_05950 | Not Available | - | 5090684 - 5091280 | 22663.5 |
| hypothetical protein | N824_05955 | Not Available | - | 5091292 - 5092035 | 27468.7 |
| hypothetical protein | N824_05965 | Not Available | - | 5094164 - 5094361 | 7026.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.