Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | N824_05815 | Not Available | - | 5051548 - 5051847 | 11352.5 |
| hypothetical protein | N824_05820 | Not Available | - | 5051835 - 5056112 | 157434.0 |
| hypothetical protein | N824_05825 | Not Available | - | 5056125 - 5063135 | 255883.0 |
| hypothetical protein | N824_05830 | Not Available | + | 5063230 - 5063391 | 6321.64 |
| hypothetical protein | N824_05835 | Not Available | + | 5063684 - 5064217 | 19114.9 |
| hypothetical protein | N824_05840 | Not Available | - | 5064258 - 5064695 | 15566.7 |
| hypothetical protein | N824_05845 | Not Available | - | 5064735 - 5065292 | 21578.4 |
| hypothetical protein | N824_05850 | Not Available | + | 5065430 - 5066380 | 36725.5 |
| hypothetical protein | N824_05855 | Not Available | + | 5066475 - 5067935 | 53489.4 |
| hypothetical protein | N824_05860 | Not Available | + | 5067937 - 5069517 | 53368.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.