Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_05765 | Not Available | + | 5041522 - 5041998 | 18723.0 |
| hypothetical protein | N824_05770 | Not Available | - | 5042024 - 5044099 | 77951.7 |
| radical sam protein | N824_05775 | Not Available | - | 5044353 - 5045321 | 37085.7 |
| hypothetical protein | N824_05780 | Not Available | - | 5045394 - 5045894 | 18725.8 |
| hypothetical protein | N824_05785 | Not Available | - | 5045887 - 5047155 | 47365.7 |
| hypothetical protein | N824_05790 | Not Available | - | 5047152 - 5048405 | 47686.6 |
| hypothetical protein | N824_05795 | Not Available | - | 5048402 - 5049328 | 34369.9 |
| hypothetical protein | N824_05800 | Not Available | - | 5049394 - 5049579 | 6660.97 |
| hypothetical protein | N824_05805 | Not Available | - | 5049589 - 5050800 | 43333.2 |
| hypothetical protein | N824_05810 | Not Available | - | 5050793 - 5051557 | 28902.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.