Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rok family transcriptional regulator | N824_05715 | Not Available | - | 5034435 - 5035307 | 31801.9 |
| hypothetical protein | N824_05720 | Not Available | - | 5035459 - 5035686 | 8710.68 |
| helicase | N824_05725 | Not Available | - | 5035731 - 5037038 | 48571.4 |
| hypothetical protein | N824_05730 | Not Available | - | 5037065 - 5037283 | 8831.92 |
| hypothetical protein | N824_05735 | Not Available | + | 5037548 - 5037802 | 9081.87 |
| hypothetical protein | N824_05740 | Not Available | + | 5037774 - 5038022 | 9238.24 |
| hypothetical protein | N824_05745 | Not Available | - | 5038057 - 5038641 | 21661.4 |
| hypothetical protein | N824_05750 | Not Available | - | 5038738 - 5039580 | 30026.2 |
| hypothetical protein | N824_05755 | Not Available | - | 5039577 - 5039771 | 5280.39 |
| ammonia channel protein | N824_05760 | Not Available | - | 5039815 - 5041182 | 48333.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.