Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_05500 | Not Available | + | 4982684 - 4984249 | 59869.9 |
| uracil phosphoribosyltransferase | N824_05505 | Not Available | + | 4984335 - 4984883 | 21007.4 |
| aspartate carbamoyltransferase | N824_05510 | Not Available | + | 4984885 - 4985817 | 34460.2 |
| hypothetical protein | N824_05515 | Not Available | + | 4985951 - 4988968 | 115479.0 |
| membrane protein | N824_05520 | Not Available | + | 4988980 - 4990683 | 63155.8 |
| hypothetical protein | N824_05525 | Not Available | + | 4990702 - 4992129 | 52729.3 |
| biopolymer transporter exbb | N824_05530 | Not Available | + | 4992132 - 4992842 | 25941.6 |
| biopolymer transporter exbd | N824_05535 | Not Available | + | 4992842 - 4993243 | 14902.4 |
| outer membrane transport energization protein tonb | N824_05540 | Not Available | + | 4993243 - 4994058 | 28542.6 |
| hypothetical protein | N824_05545 | Not Available | + | 4994102 - 4995388 | 47480.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.