Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter acrb | N824_05450 | Not Available | + | 4967271 - 4970447 | 115015.0 |
| membrane protein | N824_05455 | Not Available | + | 4970458 - 4971858 | 51318.8 |
| transcriptional regulator | N824_05460 | Not Available | + | 4971923 - 4972624 | 26803.4 |
| hypothetical protein | N824_05465 | Not Available | + | 4972653 - 4973966 | 50302.2 |
| hypothetical protein | N824_05470 | Not Available | + | 4974044 - 4974247 | 6910.57 |
| hypothetical protein | N824_05475 | Not Available | - | 4974459 - 4975475 | 38155.4 |
| hypothetical protein | N824_05480 | Not Available | + | 4975800 - 4978139 | 86217.3 |
| hypothetical protein | N824_05485 | Not Available | + | 4978148 - 4979305 | 44025.5 |
| hypothetical protein | N824_05490 | Not Available | + | 4979438 - 4980412 | 36754.1 |
| 30s ribosomal protein s1 | N824_05495 | Not Available | + | 4980586 - 4982520 | 71808.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.