Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide pyrophosphorylase | N824_05400 | Not Available | - | 4956656 - 4957498 | 30544.1 |
| hypothetical protein | N824_05405 | Not Available | - | 4957534 - 4957950 | 15591.9 |
| phosphoglyceromutase | N824_05410 | Not Available | + | 4958139 - 4959659 | 55771.2 |
| hypothetical protein | N824_05415 | Not Available | + | 4959660 - 4960190 | 20366.6 |
| hypothetical protein | N824_05420 | Not Available | - | 4960244 - 4960870 | 23777.4 |
| lon protease | N824_05425 | Not Available | + | 4961188 - 4963659 | 92124.9 |
| hypothetical protein | N824_05430 | Not Available | + | 4963765 - 4964718 | 35458.8 |
| class i peptide chain release factor | N824_05435 | Not Available | - | 4964715 - 4965125 | 15611.2 |
| cytidylate kinase | N824_05440 | Not Available | + | 4965217 - 4965897 | 25656.5 |
| hemolysin d | N824_05445 | Not Available | + | 4966059 - 4967225 | 41736.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.