Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | N824_05350 | Not Available | - | 4946121 - 4947482 | 50462.2 |
| glcnac-pi de-n-acetylase | N824_05355 | Not Available | - | 4947552 - 4948268 | 26733.9 |
| glutathione peroxidase | N824_05360 | Not Available | - | 4948296 - 4948772 | 18153.8 |
| hypothetical protein | N824_05365 | Not Available | - | 4948778 - 4949395 | 23720.1 |
| mfs transporter | N824_05370 | Not Available | + | 4949660 - 4951918 | 85689.5 |
| fur family transcriptional regulator | N824_05375 | Not Available | + | 4951982 - 4952473 | 19045.8 |
| adenylosuccinate synthetase | N824_05380 | Not Available | + | 4952511 - 4953788 | 46843.4 |
| hypothetical protein | N824_05385 | Not Available | + | 4953878 - 4955128 | 47198.3 |
| peptidase m48 | N824_05390 | Not Available | - | 4955164 - 4955991 | 29876.0 |
| acyl-phosphate glycerol 3-phosphate acyltransferase | N824_05395 | Not Available | - | 4956002 - 4956652 | 23314.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.