Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleotide pyrophosphatase | N824_05250 | Not Available | - | 4919219 - 4920460 | 46969.4 |
| metallophosphoesterase | N824_05255 | Not Available | - | 4920467 - 4921390 | 34799.2 |
| membrane protein | N824_05260 | Not Available | - | 4921424 - 4923217 | 67533.2 |
| hypothetical protein | N824_05265 | Not Available | - | 4923251 - 4925485 | 82783.1 |
| hypothetical protein | N824_05270 | Not Available | - | 4925373 - 4925885 | 18041.1 |
| hypothetical protein | N824_05275 | Not Available | - | 4926019 - 4926423 | 13456.3 |
| regulatory protein tetr | N824_05280 | Not Available | + | 4926643 - 4927269 | 24140.5 |
| hypothetical protein | N824_05285 | Not Available | - | 4927564 - 4931016 | 124606.0 |
| hypothetical protein | N824_05290 | Not Available | - | 4931135 - 4932091 | 35072.4 |
| hypothetical protein | N824_05295 | Not Available | - | 4932191 - 4933111 | 34179.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.