Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_05200 | Not Available | - | 4910571 - 4911212 | 24011.7 |
| hypothetical protein | N824_05205 | Not Available | - | 4911280 - 4912506 | 45491.9 |
| hypothetical protein | N824_05210 | Not Available | - | 4912513 - 4912809 | 10884.4 |
| kaib 1 | N824_05215 | Not Available | - | 4912802 - 4913107 | 11321.0 |
| kaic 1 | N824_05220 | Not Available | - | 4913107 - 4914831 | 63708.0 |
| hypothetical protein | N824_05225 | Not Available | + | 4915260 - 4916534 | 47124.1 |
| hypothetical protein | N824_05230 | Not Available | + | 4916570 - 4916782 | 8051.4 |
| methionyl-trna formyltransferase | N824_05235 | Not Available | + | 4916843 - 4917751 | 33408.3 |
| hypothetical protein | N824_05240 | Not Available | - | 4917757 - 4918740 | 36373.0 |
| hypothetical protein | N824_05245 | Not Available | - | 4918800 - 4919168 | 13879.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.