Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_05150 | Not Available | + | 4902667 - 4903890 | 44303.1 |
| hypothetical protein | N824_05155 | Not Available | + | 4903939 - 4904889 | 34561.8 |
| hypothetical protein | N824_05160 | Not Available | + | 4904908 - 4905996 | 41365.0 |
| hypothetical protein | N824_05165 | Not Available | + | 4906026 - 4906568 | 20866.8 |
| abc transporter permease | N824_05170 | Not Available | - | 4906577 - 4907797 | 45929.2 |
| hypothetical protein | N824_05175 | Not Available | - | 4907794 - 4907937 | 5427.99 |
| hypothetical protein | N824_05180 | Not Available | + | 4908125 - 4908421 | 11335.0 |
| hypothetical protein | N824_05185 | Not Available | + | 4908466 - 4909365 | 34270.1 |
| hypothetical protein | N824_05190 | Not Available | - | 4909496 - 4909912 | 15214.4 |
| hypothetical protein | N824_05195 | Not Available | + | 4910142 - 4910408 | 10564.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.