Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_05100 | Not Available | + | 4886654 - 4889668 | 110094.0 |
| hypothetical protein | N824_05105 | Not Available | + | 4889688 - 4891205 | 56814.1 |
| hypothetical protein | N824_05110 | Not Available | + | 4891314 - 4892714 | 54050.3 |
| rna helicase | N824_05115 | Not Available | - | 4892725 - 4894017 | 47710.4 |
| hypothetical protein | N824_05120 | Not Available | + | 4894245 - 4897388 | 116667.0 |
| hypothetical protein | N824_05125 | Not Available | + | 4897417 - 4898907 | 56564.8 |
| phospholipase c | N824_05130 | Not Available | + | 4898983 - 4901412 | 92249.9 |
| hypothetical protein | N824_05135 | Not Available | - | 4901409 - 4901612 | 7804.54 |
| hypothetical protein | N824_05140 | Not Available | + | 4901750 - 4902115 | 13529.0 |
| hypothetical protein | N824_05145 | Not Available | + | 4902119 - 4902670 | 21312.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.