Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase m13 | N824_05050 | Not Available | + | 4875853 - 4877889 | 76125.8 |
| hypothetical protein | N824_05055 | Not Available | - | 4877923 - 4878573 | 24640.2 |
| hypothetical protein | N824_05060 | Not Available | + | 4878680 - 4878883 | 7783.39 |
| hypothetical protein | N824_05065 | Not Available | + | 4879111 - 4881591 | 93076.5 |
| hypothetical protein | N824_05070 | Not Available | - | 4881595 - 4881930 | 13065.0 |
| trna (5-aminomethyl-2-thiouridylate) methyltransferase | N824_05075 | Not Available | + | 4881983 - 4882663 | 25514.7 |
| nadp-dependent aryl-alcohol dehydrogenase | N824_05080 | Not Available | + | 4882774 - 4883727 | 35646.9 |
| permease | N824_05085 | Not Available | + | 4883801 - 4884949 | 43020.5 |
| hypothetical protein | N824_05090 | Not Available | + | 4884973 - 4885269 | 10837.8 |
| nucleoside triphosphate pyrophosphohydrolase | N824_05095 | Not Available | + | 4885277 - 4886086 | 30913.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.