Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_04750 | Not Available | + | 4789141 - 4790889 | 66288.7 |
| hypothetical protein | N824_04755 | Not Available | + | 4790907 - 4791701 | 29074.3 |
| oxidoreductase | N824_04760 | Not Available | + | 4791799 - 4792593 | 28447.4 |
| hypothetical protein | N824_04765 | Not Available | - | 4792612 - 4794018 | 51676.8 |
| hypothetical protein | N824_04770 | Not Available | + | 4794034 - 4794177 | 5662.09 |
| hypothetical protein | N824_04775 | Not Available | - | 4794296 - 4794469 | 6528.1 |
| hypothetical protein | N824_04780 | Not Available | + | 4795103 - 4795198 | 3825.64 |
| Trna-arg | Not Available | Not Available | + | 4795467 - 4795538 | Not Available |
| hypothetical protein | N824_04790 | Not Available | + | 4795778 - 4796677 | 33335.5 |
| hypothetical protein | N824_04795 | Not Available | + | 4796774 - 4797721 | 34303.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.