Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_04700 | Not Available | - | 4774168 - 4774680 | 18747.8 |
| hypothetical protein | N824_04705 | Not Available | - | 4774667 - 4774783 | 4792.05 |
| gtp-binding protein ychf | N824_04710 | Not Available | + | 4774782 - 4775876 | 40031.9 |
| magnesium transporter | N824_04715 | Not Available | - | 4776121 - 4777494 | 50738.6 |
| hypothetical protein | N824_04720 | Not Available | + | 4778068 - 4781130 | 109431.0 |
| hypothetical protein | N824_04725 | Not Available | + | 4781148 - 4782656 | 55838.9 |
| hypothetical protein | N824_04730 | Not Available | + | 4782808 - 4784070 | 47660.1 |
| hypothetical protein | N824_04735 | Not Available | + | 4784130 - 4784684 | 20975.5 |
| hypothetical protein | N824_04740 | Not Available | + | 4784790 - 4785782 | 37198.8 |
| hypothetical protein | N824_04745 | Not Available | + | 4785833 - 4789123 | 121931.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.