Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_04600 | Not Available | - | 4752262 - 4752744 | 18348.6 |
| hypothetical protein | N824_04605 | Not Available | - | 4752798 - 4753484 | 24795.5 |
| abc transporter | N824_04610 | Not Available | + | 4753568 - 4754263 | 25346.6 |
| hypothetical protein | N824_04615 | Not Available | + | 4754250 - 4756790 | 93615.8 |
| cobalt-zinc-cadmium resistance protein | N824_04620 | Not Available | + | 4756905 - 4757792 | 32224.4 |
| hypothetical protein | N824_04625 | Not Available | - | 4757764 - 4758465 | 24964.7 |
| hypothetical protein | N824_04630 | Not Available | + | 4758530 - 4759678 | 42535.2 |
| hypothetical protein | N824_04635 | Not Available | - | 4759697 - 4760608 | 34903.4 |
| hypothetical protein | N824_04640 | Not Available | + | 4760780 - 4761496 | 26521.7 |
| hypothetical protein | N824_04645 | Not Available | - | 4761567 - 4762049 | 17386.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.