Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_04550 | Not Available | - | 4741839 - 4742441 | 23587.3 |
| hypothetical protein | N824_04555 | Not Available | - | 4742459 - 4742974 | 19540.1 |
| hypothetical protein | N824_04560 | Not Available | + | 4743280 - 4743801 | 20318.1 |
| hypothetical protein | N824_04565 | Not Available | - | 4743847 - 4744425 | 22160.0 |
| thioredoxin | N824_04570 | Not Available | + | 4744567 - 4744863 | 10745.2 |
| hypothetical protein | N824_04575 | Not Available | - | 4744877 - 4745959 | 41414.0 |
| hypothetical protein | N824_04580 | Not Available | - | 4745959 - 4746150 | 7213.62 |
| mfs transporter | N824_04585 | Not Available | + | 4746433 - 4747731 | 48129.4 |
| hypothetical protein | N824_04590 | Not Available | - | 4748048 - 4750954 | 110377.0 |
| hypothetical protein | N824_04595 | Not Available | - | 4751003 - 4752160 | 43265.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.