Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_04500 | Not Available | - | 4730911 - 4733475 | 97938.5 |
| hypothetical protein | N824_04505 | Not Available | + | 4733593 - 4734441 | 30957.2 |
| hypothetical protein | N824_04510 | Not Available | - | 4734507 - 4735487 | 36632.2 |
| hypothetical protein | N824_04515 | Not Available | - | 4735545 - 4736954 | 52172.4 |
| hypothetical protein | N824_04520 | Not Available | - | 4736929 - 4737252 | 11235.8 |
| hypothetical protein | N824_04525 | Not Available | - | 4737249 - 4737398 | 6034.4 |
| lmbe family protein | N824_04530 | Not Available | - | 4737411 - 4739849 | 89749.6 |
| hypothetical protein | N824_04535 | Not Available | - | 4739972 - 4740571 | 21725.0 |
| hypothetical protein | N824_04540 | Not Available | - | 4740620 - 4741051 | 15847.0 |
| tetr family transcriptional regulator | N824_04545 | Not Available | - | 4741102 - 4741707 | 23122.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.