Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_04450 | Not Available | - | 4715781 - 4717316 | 56428.1 |
| hypothetical protein | N824_04455 | Not Available | - | 4717328 - 4720414 | 112104.0 |
| hypothetical protein | N824_04460 | Not Available | - | 4720679 - 4723594 | 112126.0 |
| hypothetical protein | N824_04465 | Not Available | - | 4723686 - 4726433 | 101894.0 |
| hypothetical protein | N824_04470 | Not Available | - | 4726505 - 4727314 | 28789.1 |
| hypothetical protein | N824_04475 | Not Available | + | 4727313 - 4727423 | 4119.04 |
| cytochrome d ubiquinol oxidase subunit ii | N824_04480 | Not Available | - | 4727514 - 4728566 | 39069.0 |
| cytochrome bd ubiquinol oxidase subunit i | N824_04485 | Not Available | - | 4728535 - 4729863 | 48638.2 |
| hypothetical protein | N824_04490 | Not Available | + | 4730121 - 4730480 | 13704.7 |
| hypothetical protein | N824_04495 | Not Available | + | 4730516 - 4730905 | 14667.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.