Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_04400 | Not Available | - | 4700313 - 4702841 | 94132.5 |
| hypothetical protein | N824_04405 | Not Available | - | 4702854 - 4703915 | 39119.0 |
| hypothetical protein | N824_04410 | Not Available | - | 4703996 - 4705786 | 66042.9 |
| hypothetical protein | N824_04415 | Not Available | - | 4705807 - 4709370 | 130098.0 |
| hypothetical protein | N824_04420 | Not Available | - | 4709535 - 4710581 | 39145.8 |
| hypothetical protein | N824_04425 | Not Available | - | 4710609 - 4711241 | 17926.8 |
| hypothetical protein | N824_04430 | Not Available | - | 4711308 - 4712405 | 40745.2 |
| hypothetical protein | N824_04435 | Not Available | - | 4712492 - 4714018 | 58214.8 |
| hypothetical protein | N824_04440 | Not Available | - | 4714018 - 4714263 | 8272.45 |
| hypothetical protein | N824_04445 | Not Available | - | 4714311 - 4715714 | 51851.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.