Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_13110 | Not Available | - | 449965 - 450117 | 5619.93 |
| excinuclease abc subunit b | N824_13115 | Not Available | + | 450129 - 452165 | 77475.9 |
| hypothetical protein | N824_13120 | Not Available | + | 452165 - 452365 | 7320.81 |
| hypothetical protein | N824_13125 | Not Available | + | 452533 - 452793 | 10033.4 |
| hypothetical protein | N824_13130 | Not Available | + | 452899 - 455361 | 90447.8 |
| phosphoesterase | N824_13135 | Not Available | + | 455696 - 456439 | 28753.6 |
| glycosyl transferase | N824_13140 | Not Available | + | 456557 - 457543 | 36680.4 |
| beta-carotene 15,15-monooxygenase | N824_13145 | Not Available | + | 457573 - 458553 | 38488.6 |
| hypothetical protein | N824_13150 | Not Available | + | 458634 - 459389 | 28287.0 |
| hypothetical protein | N824_13155 | Not Available | + | 459373 - 460662 | 47264.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.