Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_19570 | Not Available | + | 1898148 - 1899212 | 39370.3 |
| hypothetical protein | N824_19575 | Not Available | + | 1899209 - 1901269 | 76638.4 |
| beta-1,4-xylanase | N824_19580 | Not Available | + | 1901335 - 1902438 | 42758.7 |
| hypothetical protein | N824_19585 | Not Available | + | 1902741 - 1904084 | 51484.1 |
| 3-oxoacyl-acp synthase | N824_19590 | Not Available | + | 1904223 - 1905473 | 43688.8 |
| hypothetical protein | N824_19595 | Not Available | + | 1905590 - 1905733 | 5333.6 |
| hypothetical protein | N824_19600 | Not Available | + | 1905737 - 1905931 | 7513.19 |
| methylcrotonoyl-coa carboxylase | N824_19605 | Not Available | + | 1905941 - 1907569 | 59192.5 |
| thioredoxin reductase | N824_19610 | Not Available | + | 1907676 - 1908638 | 34689.2 |
| beta-n-acetylhexosaminidase | N824_19615 | Not Available | + | 1908757 - 1910664 | 70583.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.