Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_19520 | Not Available | + | 1881411 - 1882736 | 48676.1 |
| hypothetical protein | N824_19525 | Not Available | + | 1882766 - 1884127 | 53332.5 |
| hypothetical protein | N824_19530 | Not Available | + | 1884150 - 1885676 | 58475.6 |
| hypothetical protein | N824_19535 | Not Available | + | 1885682 - 1886614 | 34485.0 |
| fad-dependent oxidoreductase | N824_19540 | Not Available | + | 1886621 - 1888054 | 51446.9 |
| hypothetical protein | N824_19545 | Not Available | - | 1888120 - 1888377 | 9249.09 |
| hypothetical protein | N824_19550 | Not Available | + | 1888376 - 1889350 | 35167.9 |
| hypothetical protein | N824_19555 | Not Available | - | 1889388 - 1893380 | 151852.0 |
| membrane protein | N824_19560 | Not Available | + | 1893580 - 1896597 | 110270.0 |
| membrane protein | N824_19565 | Not Available | + | 1896608 - 1898137 | 58715.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.