Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | N824_19470 | Not Available | + | 1869349 - 1870119 | 27694.3 |
| hypothetical protein | N824_19475 | Not Available | + | 1870141 - 1871757 | 61147.5 |
| inosine 5'-monophosphate dehydrogenase | N824_19480 | Not Available | + | 1871918 - 1873387 | 50312.9 |
| hypothetical protein | N824_19485 | Not Available | - | 1873517 - 1874224 | 27079.4 |
| hypothetical protein | N824_19490 | Not Available | - | 1874337 - 1874648 | 11187.5 |
| methionine aminopeptidase | N824_19495 | Not Available | + | 1874860 - 1875624 | 27729.9 |
| hypothetical protein | N824_19500 | Not Available | - | 1875669 - 1876409 | 25614.0 |
| hypothetical protein | N824_19505 | Not Available | + | 1876521 - 1876877 | 13660.6 |
| arabinan endo-1,5-alpha-l-arabinosidase | N824_19510 | Not Available | - | 1876864 - 1877841 | 36690.6 |
| hypothetical protein | N824_19515 | Not Available | + | 1878245 - 1881400 | 115183.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.