Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_19420 | Not Available | + | 1859394 - 1860260 | 31840.2 |
| hypothetical protein | N824_19425 | Not Available | + | 1860196 - 1860588 | 14273.3 |
| hypothetical protein | N824_19430 | Not Available | + | 1860590 - 1861999 | 53078.1 |
| hypothetical protein | N824_19435 | Not Available | - | 1862006 - 1862590 | 21151.5 |
| 4fe-4s ferredoxin | N824_19440 | Not Available | - | 1862583 - 1863962 | 51729.9 |
| fe-s oxidoreductase | N824_19445 | Not Available | - | 1863985 - 1864725 | 27219.1 |
| hypothetical protein | N824_19450 | Not Available | + | 1865068 - 1866102 | 38371.2 |
| hypothetical protein | N824_19455 | Not Available | + | 1866129 - 1867319 | 45118.9 |
| 5-keto-4-deoxyuronate isomerase | N824_19460 | Not Available | + | 1867344 - 1868186 | 31615.6 |
| hypothetical protein | N824_19465 | Not Available | + | 1868146 - 1869336 | 44236.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.