Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_19265 | Not Available | - | 1823855 - 1826257 | 90363.5 |
| hypothetical protein | N824_19270 | Not Available | + | 1826464 - 1827540 | 41260.6 |
| hypothetical protein | N824_19275 | Not Available | - | 1827560 - 1828915 | 50357.3 |
| hypothetical protein | N824_19280 | Not Available | + | 1828929 - 1829156 | 7855.82 |
| hypothetical protein | N824_19285 | Not Available | - | 1829442 - 1829627 | 6721.43 |
| nucleoside-diphosphate sugar epimerase | N824_19290 | Not Available | - | 1829624 - 1830268 | 23870.2 |
| hypothetical protein | N824_19295 | Not Available | - | 1830274 - 1830417 | 5125.36 |
| hypothetical protein | N824_19300 | Not Available | + | 1830738 - 1830842 | 4009.02 |
| hypothetical protein | N824_19305 | Not Available | + | 1830962 - 1831189 | 8664.5 |
| Trna-his | Not Available | Not Available | + | 1831349 - 1831425 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.