Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | N824_19215 | Not Available | - | 1812229 - 1812960 | 27960.8 |
| hypothetical protein | N824_19220 | Not Available | + | 1813191 - 1815035 | 71158.8 |
| hypothetical protein | N824_19225 | Not Available | + | 1815081 - 1816460 | 50151.4 |
| hypothetical protein | N824_19230 | Not Available | + | 1816609 - 1818804 | 82062.1 |
| hypothetical protein | N824_19235 | Not Available | - | 1818807 - 1819397 | 22976.2 |
| hypothetical protein | N824_19240 | Not Available | - | 1819486 - 1819788 | 11575.6 |
| hypothetical protein | N824_19245 | Not Available | - | 1819830 - 1820330 | 16297.1 |
| hypothetical protein | N824_19250 | Not Available | + | 1820669 - 1821637 | 37026.8 |
| hypothetical protein | N824_19255 | Not Available | + | 1821656 - 1822579 | 34994.7 |
| hypothetical protein | N824_19260 | Not Available | + | 1822647 - 1823846 | 44989.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.