Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_19165 | Not Available | - | 1793808 - 1797284 | 127869.0 |
| hypothetical protein | N824_19170 | Not Available | - | 1797397 - 1798551 | 43625.4 |
| hypothetical protein | N824_19175 | Not Available | - | 1798642 - 1799232 | 22938.8 |
| phosphoribosylformylglycinamidine synthase | N824_19180 | Not Available | - | 1799350 - 1803015 | 133836.0 |
| hypothetical protein | N824_19185 | Not Available | + | 1803094 - 1803798 | 26171.7 |
| phosphodiesterase | N824_19190 | Not Available | + | 1803854 - 1804345 | 18322.1 |
| fructose-1,6-bisphosphatase | N824_19195 | Not Available | + | 1804367 - 1805452 | 39332.0 |
| hypothetical protein | N824_19200 | Not Available | + | 1805569 - 1807575 | 73040.7 |
| hypothetical protein | N824_19205 | Not Available | + | 1807766 - 1809070 | 48700.2 |
| hypothetical protein | N824_19210 | Not Available | + | 1809086 - 1812226 | 118734.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.