Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-fucose transporter | N824_19110 | Not Available | + | 1781714 - 1782952 | 44287.0 |
| hypothetical protein | N824_19115 | Not Available | + | 1782979 - 1783674 | 25794.5 |
| phosphoribosylformylglycinamidine cyclo-ligase | N824_19120 | Not Available | - | 1783756 - 1784937 | 42980.0 |
| glutamine synthetase | N824_19125 | Not Available | - | 1785078 - 1787264 | 81417.5 |
| hypothetical protein | N824_19135 | Not Available | + | 1787713 - 1788567 | 31408.8 |
| hypothetical protein | N824_19140 | Not Available | + | 1788694 - 1789251 | 20523.8 |
| hypothetical protein | N824_19145 | Not Available | - | 1789310 - 1790017 | 26805.1 |
| nadh-dependent dehydrogenase | N824_19150 | Not Available | - | 1790030 - 1791397 | 50612.9 |
| hypothetical protein | N824_19155 | Not Available | - | 1791428 - 1792147 | 26910.1 |
| glycan metabolism protein ragb | N824_19160 | Not Available | - | 1792211 - 1793779 | 58564.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.