Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_19060 | Not Available | + | 1769939 - 1770412 | 18072.1 |
| short-chain dehydrogenase | N824_19065 | Not Available | + | 1770399 - 1771193 | 29092.3 |
| epimerase | N824_19070 | Not Available | + | 1771208 - 1772191 | 36509.6 |
| hypothetical protein | N824_19075 | Not Available | + | 1772202 - 1773326 | 43657.3 |
| hypothetical protein | N824_19080 | Not Available | + | 1773307 - 1774074 | 29668.9 |
| hypothetical protein | N824_19085 | Not Available | - | 1774078 - 1775514 | 53523.7 |
| hypothetical protein | N824_19090 | Not Available | + | 1775609 - 1776115 | 19652.3 |
| hypothetical protein | N824_19095 | Not Available | + | 1776137 - 1776928 | 29364.2 |
| peptidase s46 | N824_19100 | Not Available | + | 1776976 - 1779138 | 80893.9 |
| hypothetical protein | N824_19105 | Not Available | + | 1779395 - 1781668 | 86204.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.