Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_19010 | Not Available | + | 1758521 - 1758787 | 9879.66 |
| glyceraldehyde-3-phosphate dehydrogenase | N824_19015 | Not Available | - | 1758784 - 1760226 | 53635.4 |
| rna polymerase sigma factor rpod | N824_19020 | Not Available | - | 1760314 - 1761174 | 32680.1 |
| xre family transcriptional regulator | N824_19025 | Not Available | + | 1761538 - 1761741 | 7507.62 |
| hypothetical protein | N824_19030 | Not Available | - | 1761945 - 1762274 | 11834.6 |
| beta-lactamase | N824_19035 | Not Available | - | 1762366 - 1763214 | 32269.6 |
| dihydrolipoyl dehydrogenase | N824_19040 | Not Available | - | 1763282 - 1764670 | 48798.0 |
| hypothetical protein | N824_19045 | Not Available | + | 1764969 - 1768256 | 119769.0 |
| hypothetical protein | N824_19050 | Not Available | + | 1768675 - 1768893 | 8598.09 |
| hypothetical protein | N824_19055 | Not Available | + | 1769043 - 1769837 | 30918.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.