Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_18960 | Not Available | - | 1751204 - 1752823 | 62220.5 |
| hypothetical protein | N824_18965 | Not Available | - | 1752844 - 1753179 | 12590.4 |
| transcriptional regulator | N824_18970 | Not Available | - | 1753199 - 1753495 | 11128.7 |
| membrane protein | N824_18975 | Not Available | - | 1753495 - 1754124 | 23266.9 |
| hypothetical protein | N824_18980 | Not Available | - | 1754121 - 1754258 | 5339.63 |
| abc transporter atp-binding protein | N824_18985 | Not Available | + | 1754245 - 1754895 | 23462.6 |
| hypothetical protein | N824_18990 | Not Available | + | 1754899 - 1755228 | 12281.9 |
| hypothetical protein | N824_18995 | Not Available | + | 1755228 - 1755842 | 23669.8 |
| hypothetical protein | N824_19000 | Not Available | + | 1755889 - 1757457 | 56679.3 |
| hypothetical protein | N824_19005 | Not Available | - | 1757465 - 1758397 | 34540.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.