Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_18805 | Not Available | + | 1721489 - 1722055 | 21783.7 |
| hypothetical protein | N824_18810 | Not Available | + | 1722152 - 1723219 | 41026.3 |
| hypothetical protein | N824_18815 | Not Available | + | 1723323 - 1725626 | 84307.1 |
| hypothetical protein | N824_18820 | Not Available | + | 1725550 - 1726833 | 47267.5 |
| hypothetical protein | N824_18825 | Not Available | + | 1726858 - 1728735 | 70261.7 |
| hypothetical protein | N824_18830 | Not Available | - | 1728765 - 1728932 | 6584.26 |
| glutamate dehydrogenase | N824_18835 | Not Available | + | 1729092 - 1730408 | 48177.9 |
| Trna-leu | Not Available | Not Available | + | 1730458 - 1730545 | Not Available |
| Trna-gly | Not Available | Not Available | + | 1730591 - 1730666 | Not Available |
| Trna-leu | Not Available | Not Available | + | 1730685 - 1730772 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.