Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chey | N824_18755 | Not Available | + | 1707876 - 1709213 | 50060.0 |
| hypothetical protein | N824_18760 | Not Available | + | 1709412 - 1710518 | 41203.1 |
| potassium-transporting atpase subunit a | N824_18765 | Not Available | + | 1710897 - 1712615 | 62219.7 |
| potassium-transporting atpase subunit b | N824_18770 | Not Available | + | 1712622 - 1714652 | 72311.7 |
| potassium transporter ktrb | N824_18775 | Not Available | + | 1714728 - 1715294 | 20090.6 |
| hypothetical protein | N824_18780 | Not Available | + | 1715502 - 1716572 | 39092.9 |
| frrc, osmosensitive k+ channel histidine kinase | N824_18785 | Not Available | + | 1716798 - 1717928 | 42796.2 |
| histidine kinase | N824_18790 | Not Available | + | 1718038 - 1719711 | 63183.2 |
| aspartate kinase | N824_18795 | Not Available | - | 1719722 - 1721098 | 50950.6 |
| hypothetical protein | N824_18800 | Not Available | + | 1721097 - 1721270 | 6789.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.