Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_18705 | Not Available | + | 1698951 - 1700315 | 50646.6 |
| hypothetical protein | N824_18710 | Not Available | + | 1700382 - 1702970 | 97899.0 |
| hypothetical protein | N824_18715 | Not Available | + | 1703011 - 1704414 | 50639.3 |
| hypothetical protein | N824_18720 | Not Available | + | 1704472 - 1704903 | 16046.5 |
| hypothetical protein | N824_18725 | Not Available | + | 1704903 - 1705175 | 9272.12 |
| hypothetical protein | N824_18730 | Not Available | + | 1705176 - 1705304 | 5090.47 |
| hypothetical protein | N824_18735 | Not Available | + | 1705301 - 1705927 | 21095.3 |
| hypothetical protein | N824_18740 | Not Available | + | 1705939 - 1706325 | 14730.7 |
| Trna-cys | Not Available | Not Available | + | 1706571 - 1706644 | Not Available |
| hypothetical protein | N824_18750 | Not Available | + | 1706896 - 1707855 | 35848.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.