Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_18655 | Not Available | + | 1689219 - 1690454 | 44702.2 |
| rnd transporter | N824_18660 | Not Available | + | 1690458 - 1691672 | 44712.9 |
| hypothetical protein | N824_18665 | Not Available | + | 1691760 - 1692323 | 19716.2 |
| hypothetical protein | N824_18670 | Not Available | + | 1692366 - 1692767 | 14463.1 |
| abc transporter | N824_18675 | Not Available | - | 1692759 - 1693925 | 43887.5 |
| abc transporter | N824_18680 | Not Available | - | 1693894 - 1695078 | 44780.2 |
| secretion protein hlyd | N824_18685 | Not Available | - | 1695078 - 1696067 | 36568.2 |
| hypothetical protein | N824_18690 | Not Available | - | 1696067 - 1696315 | 9351.1 |
| hypothetical protein | N824_18695 | Not Available | - | 1696367 - 1697527 | 43225.9 |
| hypothetical protein | N824_18700 | Not Available | - | 1697689 - 1698759 | 38968.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.