Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_18605 | Not Available | + | 1680806 - 1681264 | 16611.8 |
| hypothetical protein | N824_18610 | Not Available | - | 1681333 - 1681860 | 20000.2 |
| hypothetical protein | N824_18615 | Not Available | + | 1681906 - 1682316 | 15328.7 |
| hypothetical protein | N824_18620 | Not Available | + | 1682329 - 1682874 | 20494.9 |
| dtdp-4-dehydrorhamnose reductase | N824_18625 | Not Available | + | 1682955 - 1683821 | 31849.1 |
| hypothetical protein | N824_18630 | Not Available | + | 1683906 - 1684304 | 14928.5 |
| hypothetical protein | N824_18635 | Not Available | + | 1684403 - 1684747 | 12430.0 |
| metal transporter | N824_18640 | Not Available | + | 1684799 - 1686070 | 47256.3 |
| metal transporter | N824_18645 | Not Available | + | 1686088 - 1688004 | 70738.5 |
| membrane protein | N824_18650 | Not Available | + | 1687991 - 1689241 | 48122.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.