Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | N824_18555 | Not Available | + | 1672913 - 1673677 | 28695.6 |
| Trna-leu | Not Available | Not Available | + | 1673698 - 1673781 | Not Available |
| hypothetical protein | N824_18565 | Not Available | + | 1673921 - 1674085 | 6425.84 |
| hypothetical protein | N824_18570 | Not Available | + | 1674312 - 1675607 | 49550.4 |
| hypothetical protein | N824_18575 | Not Available | - | 1675765 - 1676964 | 43530.0 |
| ribosome biogenesis gtpase rsga | N824_18580 | Not Available | + | 1677316 - 1678368 | 39815.6 |
| hypothetical protein | N824_18585 | Not Available | - | 1678424 - 1679080 | 24054.8 |
| hypothetical protein | N824_18590 | Not Available | + | 1679268 - 1680005 | 27863.5 |
| glyoxalase | N824_18595 | Not Available | + | 1680077 - 1680439 | 13574.9 |
| hypothetical protein | N824_18600 | Not Available | + | 1680562 - 1680720 | 5952.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.