Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_18505 | Not Available | + | 1662964 - 1663458 | 18723.7 |
| hypothetical protein | N824_18510 | Not Available | + | 1663475 - 1663852 | 14382.3 |
| phosphatidylserine synthase | N824_18515 | Not Available | - | 1663849 - 1664535 | 25391.6 |
| transcription termination factor rho | N824_18520 | Not Available | - | 1664539 - 1666236 | 62536.2 |
| orotidine 5'-phosphate decarboxylase | N824_18525 | Not Available | + | 1666509 - 1667339 | 30883.0 |
| hypothetical protein | N824_18530 | Not Available | + | 1667336 - 1668241 | 33189.6 |
| pspc family transcriptional regulator | N824_18535 | Not Available | + | 1668387 - 1668608 | 8772.07 |
| hypothetical protein | N824_18540 | Not Available | - | 1668628 - 1669278 | 23225.0 |
| cell division protein ftsk | N824_18545 | Not Available | + | 1669638 - 1672193 | 95799.0 |
| gliding motility protein | N824_18550 | Not Available | + | 1672227 - 1672853 | 23413.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.