Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_18455 | Not Available | + | 1653074 - 1653892 | 29856.3 |
| amp nucleosidase | N824_18460 | Not Available | + | 1654145 - 1655008 | 31706.5 |
| phosphohistidine phosphatase | N824_18465 | Not Available | - | 1655005 - 1655505 | 18651.0 |
| hypothetical protein | N824_18470 | Not Available | - | 1655516 - 1656454 | 35408.0 |
| nucleotidyltransferase | N824_18475 | Not Available | - | 1656509 - 1657009 | 18076.9 |
| hypothetical protein | N824_18480 | Not Available | - | 1657012 - 1657566 | 19587.6 |
| hypothetical protein | N824_18485 | Not Available | - | 1657572 - 1658552 | 35175.5 |
| dna polymerase iv | N824_18490 | Not Available | - | 1658597 - 1660282 | 63133.0 |
| hypothetical protein | N824_18495 | Not Available | + | 1660388 - 1661053 | 24698.7 |
| protease iv | N824_18500 | Not Available | - | 1661133 - 1662905 | 64780.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.