Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_18355 | Not Available | + | 1621518 - 1623596 | 77180.5 |
| hypothetical protein | N824_18360 | Not Available | + | 1623602 - 1625980 | 88791.3 |
| hypothetical protein | N824_18365 | Not Available | + | 1625997 - 1628369 | 87584.1 |
| hypothetical protein | N824_18370 | Not Available | + | 1628387 - 1629739 | 46856.1 |
| hypothetical protein | N824_18375 | Not Available | + | 1629768 - 1630757 | 36190.4 |
| hypothetical protein | N824_18380 | Not Available | + | 1630774 - 1633134 | 87664.0 |
| hypothetical protein | N824_18385 | Not Available | + | 1633160 - 1635523 | 87284.5 |
| hypothetical protein | N824_18390 | Not Available | + | 1635672 - 1638044 | 88841.2 |
| hypothetical protein | N824_18395 | Not Available | + | 1638065 - 1640461 | 88714.2 |
| phosphonate abc transporter atp-binding protein | N824_18400 | Not Available | + | 1640487 - 1641176 | 25541.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.