Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfate adenylyltransferase subunit 2 | N824_18305 | Not Available | + | 1610892 - 1611797 | 34342.7 |
| sulfate adenylyltransferase | N824_18310 | Not Available | + | 1611797 - 1613047 | 46671.6 |
| glycogen synthase | N824_18315 | Not Available | + | 1613498 - 1614904 | 53159.6 |
| glucose-1-phosphate adenylyltransferase | N824_18320 | Not Available | + | 1614917 - 1616182 | 45859.2 |
| hypothetical protein | N824_18325 | Not Available | - | 1616183 - 1616344 | 6081.54 |
| hypothetical protein | N824_18330 | Not Available | - | 1616542 - 1617549 | 33773.2 |
| atpase aaa | N824_18335 | Not Available | - | 1617549 - 1618919 | 51429.4 |
| transporter | N824_18340 | Not Available | + | 1619081 - 1620346 | 47536.1 |
| abc transporter | N824_18345 | Not Available | + | 1620480 - 1621178 | 25532.8 |
| hypothetical protein | N824_18350 | Not Available | + | 1621201 - 1621497 | 8412.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.