Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cdp-alcohol phosphatidyltransferase | N824_18255 | Not Available | - | 1600720 - 1601415 | 26465.6 |
| phosphohydrolase | N824_18260 | Not Available | - | 1601465 - 1602661 | 45171.0 |
| hypothetical protein | N824_18265 | Not Available | - | 1602772 - 1603755 | 37403.1 |
| hypothetical protein | N824_18270 | Not Available | + | 1603941 - 1604939 | 37829.6 |
| hypothetical protein | N824_18275 | Not Available | - | 1605054 - 1605365 | 10993.5 |
| hypothetical protein | N824_18280 | Not Available | + | 1605667 - 1605783 | 4560.5 |
| nitrite reductase | N824_18285 | Not Available | + | 1605770 - 1607854 | 77696.3 |
| uroporphyrin-iii c-methyltransferase | N824_18290 | Not Available | + | 1607859 - 1608650 | 28376.2 |
| siroheme synthase | N824_18295 | Not Available | + | 1608656 - 1610170 | 54832.6 |
| phosphoadenosine phosphosulfate reductase | N824_18300 | Not Available | + | 1610173 - 1610877 | 27413.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.