Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoesterase | N824_18205 | Not Available | + | 1587200 - 1587952 | 27359.8 |
| hypothetical protein | N824_18210 | Not Available | - | 1588070 - 1589314 | 47185.7 |
| hypothetical protein | N824_18215 | Not Available | - | 1589404 - 1590564 | 43393.8 |
| hypothetical protein | N824_18220 | Not Available | - | 1590567 - 1592015 | 52054.0 |
| hypothetical protein | N824_18225 | Not Available | - | 1592051 - 1593292 | 45078.9 |
| hypothetical protein | N824_18230 | Not Available | - | 1593427 - 1594917 | 55461.4 |
| hypothetical protein | N824_18235 | Not Available | - | 1594929 - 1598048 | 115870.0 |
| hypothetical protein | N824_18240 | Not Available | - | 1598349 - 1598933 | 19200.2 |
| hypothetical protein | N824_18245 | Not Available | - | 1599234 - 1599992 | 27127.3 |
| hypothetical protein | N824_18250 | Not Available | - | 1600310 - 1600720 | 15175.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.