Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | N824_18155 | Not Available | + | 1574240 - 1575547 | 47975.1 |
| hypothetical protein | N824_18160 | Not Available | + | 1575567 - 1576232 | 23427.3 |
| hypothetical protein | N824_18165 | Not Available | + | 1576330 - 1577112 | 28504.6 |
| hypothetical protein | N824_18170 | Not Available | + | 1577012 - 1578082 | 38844.2 |
| hypothetical protein | N824_18175 | Not Available | + | 1578072 - 1579832 | 65236.2 |
| hypothetical protein | N824_18180 | Not Available | + | 1579922 - 1581184 | 47809.4 |
| hypothetical protein | N824_18185 | Not Available | + | 1581196 - 1582140 | 34191.5 |
| hypothetical protein | N824_18190 | Not Available | + | 1582137 - 1585160 | 111097.0 |
| transcriptional regulator | N824_18195 | Not Available | + | 1585205 - 1585882 | 25622.0 |
| hypothetical protein | N824_18200 | Not Available | + | 1585879 - 1587132 | 47891.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.