Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional histidinal dehydrogenase/ histidinol dehydrogenase | N824_17955 | Not Available | - | 1530747 - 1532036 | 46316.5 |
| atp phosphoribosyltransferase | N824_17960 | Not Available | - | 1532105 - 1532956 | 30798.5 |
| hypothetical protein | N824_17965 | Not Available | + | 1532947 - 1533081 | 4857.79 |
| rna polymerase sigma 70 | N824_17970 | Not Available | + | 1533448 - 1534026 | 22596.4 |
| hypothetical protein | N824_17975 | Not Available | + | 1534129 - 1535283 | 42919.3 |
| hypothetical protein | N824_17980 | Not Available | + | 1535284 - 1536210 | 31725.5 |
| hypothetical protein | N824_17985 | Not Available | + | 1536198 - 1536776 | 22414.8 |
| hypothetical protein | N824_17990 | Not Available | + | 1536960 - 1539584 | 99038.5 |
| hypothetical protein | N824_17995 | Not Available | + | 1539705 - 1541243 | 59378.2 |
| hypothetical protein | N824_18000 | Not Available | + | 1541265 - 1543310 | 76221.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.